Jorg Dieter Becker
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Data da última atualização
»Last update
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17/08/2015 |
Dados pessoais (Personal data)
Nome completo
Full name |
Jorg Dieter Becker |
Nome em citações bibliográficas
Quoting name |
Becker, JD |
Endereço profissional
Professional address |
Fundação Calouste Gulbenkian Instituto Gulbenkian de Ciência R da Quinta Grande, 6 Oeiras 2781-156 Oeiras Portugal Apartado: 14 Telefone: (+351)214407900 Fax: (+351)214407970 Correio electrónico: jbecker@igc.gulbenkian.pt Homepage: www.igc.gulbenkian.pt |
Sexo
Gender |
Masculino»Male |
Graus Académicos
(Academic Degrees)
2001 |
Doutoramento Phd |
Biologia
(5 anos » years)
.
University of Bielefeld ,
Alemanha.
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1996 |
Licenciatura Licentiate degree |
Biologia
(4 anos » years)
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University of Bielefeld ,
Alemanha.
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Produção científica, técnica e artística/cultural
(Scientific, technical and artistical/cultural
production)
Capítulos de livros publicados Published book chapters |
1. |
Boavida, L.C.; Hernandez-Coronado, M.; Becker, JD. 2015. Setting the stage for the next generation: Epigenetic reprogramming during sexual plant reproduction. In Nuclear functions in plant transcription, signaling and development, ed. Pontes O, Jin H, 93 - 118. ISBN: 978-1-4939-2. New York: Springer Science+Business Media. |
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2. |
Becker, JD; Moreira, L.M.. 2007. Análise do transcritoma através da tecnologia de microarrays. In O Mundo do RNA: novos desafios e perspectivas futuras, ed. Arraiano C, Fialho AM , 195 - 221. . Lisboa: Lidel-edições técnicas. |
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Artigos em revistas com arbitragem científica Papers in periodics with scientific refereeing |
1. |
Monteiro, Joana; Aires, Rita; Becker, Jörg D; Jacinto, António; Certal, Ana C; Rodríguez-León, Joaquín. 2014. "V-ATPase Proton Pumping Activity Is Required for Adult Zebrafish Appendage Regeneration", PLoS ONE 9, 3: e92594 - e9. |
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2. |
Becker, Jörg D; Takeda, Seiji; Borges, Filipe; Dolan, Liam; Feijó, José A. 2014. "Transcriptional profiling of Arabidopsis root hairs and pollen defines an apical cell growth signature", BMC Plant Biology 14, 1: 197 - 197.
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3. |
Santos, Mário R; Marques, Andreia T; Becker, Jörg D; Moreira, Leonilde M. 2014. "The Sinorhizobium meliloti EmrR Regulator Is Required for Efficient Colonization of Medicago sativa Root Nodules", Molecular Plant-Microbe Interactions 27, 4: 388 - 399. |
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4. |
Gil, Fátima N; Becker, Jörg D; Viegas, Cristina A. 2014. " Potential Mechanisms Underlying Response to Effects of the Fungicide Pyrimethanil from Gene Expression Profiling
in Saccharomyces cerevisiae ", Journal of Agricultural and Food Chemistry 62, 23: 5237 - 5247.
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5. |
Pereira, Patrícia A.; Navarro-Costa, Paulo; Martinho, Rui Gonçalo; Becker, Jörg D.. 2014. "Evolutionarily conserved mechanisms of male germline development in flowering plants and animals: Figure 1", Biochemical Society Transactions 42, 2: 377 - 382.
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6. |
Martins, Isabel; Hartmann, Diego O; Alves, Paula C; Martins, Celso; Garcia, Helga; Leclercq, Céline C; Ferreira, Rui; He, Ji; Renaut, Jenny; Becker, Jörg D; Silva Pereira, C. 2014. "Elucidating how the saprophytic fungus Aspergillus nidulans uses the plant polyester suberin as carbon source", BMC Genomics 15, 1: 613 - 613.
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7. |
Boavida, L.C.; Qin, P.; Broz, M.; Becker, J.D.; Mccormick, S.. 2013. "Arabidopsis tetraspanins are confined to discrete expression domains and cell types in reproductive tissues and form homo
and heterodimers when expressed in yeast", Plant Physiology 163, 2: 696 - 712. |
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8. |
Limpens, E.; Moling, S.; Hooiveld, G.; Pereira, P.A.; Bisseling, T.; Becker, J.D.; Küster, H.. 2013. "Cell- and Tissue-Specific Transcriptome Analyses of Medicago truncatula Root Nodules", PLoS ONE 8, 5: 0064377 - 0064377. |
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9. |
Ferreira, S.A.; Silva, N.I.; Oliveira, H.V.; Becker, D.J.; Givskov, M.; Ryan, P.R.; Fernandes, F.; Moreira, L.M.. 2013. "Comparative transcriptomic analysis of the Burkholderia cepacia tyrosine kinase bceF mutant reveals a role in tolerance to
stress, biofilm formation, and virulence", Applied and Environmental Microbiology 79, 9: 3009 - 30. |
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10. |
Costa, M.; Nobre, M.S.; Becker, J.D.; Masiero, S.; Amorim, M.I.; Pereira, L.G.; Coimbra, S.. 2013. "Expression-based and co-localization detection of arabinogalactan protein 6 and arabinogalactan protein 11 interactors in
Arabidopsis pollen and pollen tubes", BMC Plant Biology 13, 1: 7 - 7. |
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11. |
Wang, M.; Verdier, J.; Benedito, V.A.; Tang, Y.; Murray, J.D.; Ge, Y.; Becker, J.D.; Carvalho, H.G.; Rogers, C.; Udvardi, M.; He, J.. 2013. "LegumeGRN: A Gene Regulatory Network Prediction Server for Functional and Comparative Studies", PLoS ONE 8, 7: e67434 - e67434. |
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12. |
Nunes, R.J.; De Oliveira, P; Lages, A.; Becker, J.D.; Marcelino, P.; Barroso, E.; Perdigoto, R.; Kelly, J.W.; Quintas, A.; Santos, S.C.R.. 2013. "Transthyretin proteins regulate angiogenesis by conferring different molecular identities to endothelial cells", Journal of Biological Chemistry 288, 44: 31752 - 31. |
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13. |
Borges, F.; Gardner, R.; Lopes, T.; Calarco, J.P.; Boavida, L.C.; Slotkin, R.K.; Martienssen, R.A.; Becker, J.D.. 2012. "FACS-based purification of Arabidopsis microspores, sperm cells and vegetative nuclei", Plant Methods 8, 1: 44 - 44. |
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14. |
Seabra, A.R.; Pereira, P.A.; Becker, J.D.; Carvalho, H.G.. 2012. "Inhibition of glutamine synthetase by phosphinothricin leads to transcriptome reprograming in root nodules of Medicago truncatula", Molecular Plant-Microbe Interactions 25, 7: 976 - 992. |
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15. |
Ortu, G.; Balestrini, R.; Pereira, P.A.; Becker, J.D.; Küster, H.; Bonfante, P.. 2012. "Plant genes related to gibberellin biosynthesis and signaling are differentially regulated during the early Stages of AM fungal
interactions", Molecular Plant 5, 4: 951 - 954. |
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16. |
Calarco, J.P.; Borges, F.; Donoghue, M.T.A.; Van Ex, F; Jullien, P.E.; Lopes, T.; Gardner, R.; Berger, F.; Feijó, J.A.; Becker, J.D.; Martienssen, R.A.. 2012. "Reprogramming of DNA methylation in pollen guides epigenetic inheritance via small RNA", Cell 151, 1: 194 - 205. |
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17. |
Hogekamp, C.; Arndt, D.; Pereira, P.; Becker, J. D; Hohnjec, N.; Kuster, H.. 2011. "Laser-microdissection unravels cell-type specific transcription in arbuscular mycorrhizal roots, including CAAT-box TF gene
expression correlating with fungal contact and spread", PLANT PHYSIOLOGY, 9999: 9999 - 99999.
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18. |
Silva, I. N; Ferreira, A. S; Becker, J. D; Zlosnik, J. E. A; Speert, D. P; He, J.; Mil-Homens, D.; Moreira, L. M. 2011. "Mucoid morphotype variation of Burkholderia multivorans during chronic cystic fibrosis lung infection is correlated with changes
in metabolism, motility, biofilm formation and virulence", Microbiology 157, 11: 3124 - 3137.
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19. |
Borges, F.; Pereira, P. A; Slotkin, R. K; Martienssen, R. A; Becker, J. D. 2011. "MicroRNA activity in the Arabidopsis male germline", Journal of Experimental Botany 62, 5: 1611 - 1620.
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20. |
Gil, Fátima N; Gonçalves, Alina C; Jacinto, Maria J; Becker, Jörg D; Viegas, Cristina A. 2011. "Transcriptional profiling in Saccharomyces cerevisiae relevant for predicting alachlor mechanisms of toxicity", Environmental Toxicology and Chemistry 30, 11: 2506 - 2518.
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21. |
Goncalves, Lisa; Filipe, Mario; Marques, Sara; Salgueiro, Ana-Marisa; Becker, Jorg D; Belo, Jose A. 2011. "Identification and functional analysis of novel genes expressed in the Anterior Visceral Endoderm", The International Journal of Developmental Biology 55, 3: 281 - 295.
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22. |
Bento, M.; Correia, E.; Tavares, A.T.; Becker, J.D.; Belo, J.A.. 2011. "Identification of differentially expressed genes in the heart precursor cells of the chick embryo", Gene Expression Patterns 11, 7: 437 - 447. |
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23. |
Boavida, L.C.; Borges, F.; Becker, J.D.; Feijó, J.A.. 2011. "Whole genome analysis of gene expression reveals coordinated activation of signaling and metabolic pathways during pollen-pistil
interactions in Arabidopsis", Plant Physiology 155, 4: 2066 - 20. |
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24. |
Santos, Mario R; Cosme, Ana M; Becker, Jorg D; Medeiros, Joao M. C; Mata, Marcia F; Moreira, Leonilde M. 2010. "Absence of functional TolC protein causes increased stress response gene expression in Sinorhizobium meliloti", BMC Microbiology 10, 1: 180 - 180.
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25. |
Schlüter, Jan-Philip; Reinkensmeier, Jan; Daschkey, Svenja; Evguenieva-Hackenberg, Elena; Janssen, Stefan; Jänicke, Sebastian; Becker, Jörg D; Giegerich, Robert; Becker, Anke. 2010. "A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti", BMC Genomics 11, 1: 245 - 245.
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26. |
Mira, Nuno P; Becker, Jorg D; Sá-Correia, Isabel. 2010. " Genomic Expression Program Involving the Haa1p-Regulon in Saccharomyces cerevisiae
Response to Acetic Acid ", OMICS: A Journal of Integrative Biology 14, 5: 587 - 601.
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27. |
Mira, N.P.; Becker, J.D.; Sá-Correia, I.. 2010. "Genomic expression program involving the Haa1p-regulon in Saccharomyces cerevisiae response to acetic acid", OMICS A Journal of Integrative Biology 14, 5: 587 - 601. |
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28. |
Mira, Nuno P; Lourenco, A. B; Fernandes, Alexandra R; Becker, Jorg D; Sá-Correia, Isabel. 2009. "The RIM101 pathway has a role in Saccharomyces cerevisiae adaptive response and resistance to propionic acid and other weak
acids", FEMS Yeast Research 9, 2: 202 - 216.
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29. |
Slotkin, R. K; Vaughn, M.; Borges, F.; Tanurdzic, M.; Becker, J. D; Feijo, J. A; Martienssen, R. A. 2009. "Epigenetic Reprogramming and Small RNA Silencing of Transposable Elements in Pollen", Cell 136, 3: 461 - 472.
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30. |
Dos Santos, S; Tenreiro, S.; Palma, M.; Becker, J. D; Sá-Correia, I.. 2009. "Transcriptomic profiling of the Saccharomyces cerevisiae response to quinine reveals a glucose limitation response attributable
to drug-induced inhibition of glucose uptake", Antimicrobial Agents and Chemotherapy 53, 12: 5213 - 52. |
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31. |
Borges, F.; Gomes, G.; Gardner, R.; Moreno, N.; McCormick, S.; Feijo, J. A; Becker, J. D. 2008. "Comparative transcriptomics of Arabidopsis sperm cells", Plant Physiology 148, 2: 1168 - 1181.
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32. |
Trindade, A.; Ram Kumar, S; Scehnet, J. S; Lopes-da-Costa, L.; Becker, J.; Jiang, W.; Liu, R.; Gill, P. S; Duarte, A.. 2008. "Overexpression of delta-like 4 induces arterialization and attenuates vessel formation in developing mouse embryos", Blood 112, 5: 1720 - 1729.
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33. |
Becker, J. D; Feijo, J. A. 2007. "How many genes are needed to make a pollen tube? lessons from transcriptomics", Annals of Botany 100, 6: 1117 - 1123.
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34. |
Johnston, A. J; Meier, P.; Gheyselinck, J.; Wuest, S. E; Federer, M.; Schlagenhauf, E.; Becker, J. D; Grossniklaus, U.. 2007. "Genetic subtraction profiling identifies genes essential for Arabidopsis reproduction and reveals interaction between the
female gametophyte and the maternal sporophyte", Genome Biology 8, 10: 204 - 204.
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35. |
Marsch-Martinez, N.; Greco, R.; Becker, J. D; Dixit, S.; Bergervoet, J. H. W; Karaba, A.; de Folter, S; Pereira, A.. 2006. "BOLITA, an Arabidopsis AP2/ERF-like transcription factor that affects cell expansion and proliferation/differentiation pathways", Plant Molecular Biology 62, 6: 825 - 843.
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36. |
Neves, H.; Weerkamp, F.; Gomes, A. C; Naber, B. A. E; Gameiro, P.; Becker, J. D; Lucio, P.; Clode, N.; Van Dongen, J. J. M; Staal, F. J. T; Parreira, L.. 2006. "Effects of Delta1 and Jagged1 on early human hematopoiesis: Correlation with expression of notch signaling-related genes in
CD34( ) cells", Stem Cells 24, 5: 1328 - 1337.
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37. |
Teixeira, M. C; Fernandes, A. R; Mira, N. P; Becker, J. D; Sa-Correia, I.. 2006. "Early transcriptional response of Saccharomyces cerevisiae to stress imposed by the herbicide 2,4-dichlorophenoxyacetic acid", Fems Yeast Research 6, 2: 230 - 248.
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38. |
Boavida, L. C; Becker, J. D; Feijo, J. A. 2005. "The making of gametes in higher plants", International Journal of Developmental Biology 49, 5-6: 595 - 614.
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39. |
Boavida, L. C; Vieira, A. M; Becker, J. D; Feijo, J. A. 2005. "Gametophyte interaction and sexual reproduction: how plants make a zygote", International Journal of Developmental Biology 49, 5-6: 615 - 632.
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40. |
Pina, C.; Pinto, F.; Feijo, J. A; Becker, J. D. 2005. "Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control,
and gene expression regulation", Plant Physiology 138, 2: 744 - 756.
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41. |
Marques, C.C.; Horta, A.E.; Vasques, M.I.; Baptista, M.C.; Becker, J.D.; Pimenta, J.; Pereira, R.M.. 2005. "Cyclooxygenase-2 (COX-2) expression by in vitro produced bovine embryos. Preliminary results", Revista Portuguesa de Ciências Veterinárias, 1: 181 - 184.
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42. |
Sessa, G.; Carabelli, M.; Sassi, M.; Ciolfi, A.; Possenti, M.; Mittempergher, F.; Becker, J. D; Morelli, G.; Ruberti, I.. 2005. "A dynamic balance between gene activation and repression regulates the shade avoidance response in Arabidopsis", Genes and Development 19, 23: 2811 - 28. |
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43. |
Feijo, J. A; Costa, S. S; Prado, A. M; Becker, J. D; Certal, A. C. 2004. "Signalling by tips", Current Opinion in Plant Biology 7, 5: 589 - 598.
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44. |
Neves, H.; Weerkamp, F.; Naber, B. A. E; Becker, J. D; Lucio, P.; Clode, N.; van Dongen, J; Staal, F. J. T; Parreira, L.. 2004. "Differential effects of Notch ligands Delta1 and Jagged1 in human myelopoiesis", Experimental Hematology 32, 7: 257 - 257. |
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45. |
Neves, H.; Weerkamp, F.; Naber, B. A. E; Gameiro, P.; Becker, J. D; Lucio, P.; Clode, N.; van Dongen, J. J. M; Staal, F. J. T; Parreira, L.. 2004. "Differential effects of Delta1 and jagged1 in early human myelopoiesis: Correlation with distinct gene-expression profiles
in CD34 cells", Blood 104, 11: 2786 - 2786. |
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46. |
Becker, J. D; Boavida, L. C; Carneiro, J.; Haury, M.; Feijo, J. A. 2003. "Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome", Plant Physiology 133, 2: 713 - 725. |
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47. |
Frosch, S. C; Becker, J. D; Schultze, M.; Schlesier, B.; Kahmann, U.; Puhler, A.; Perlick, A. M. 2002. "Characterization of NVf32: a narbonin-like nodulin of high abundance in Vicia faba L", Plant Science 162, 3: 401 - 411.
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48. |
Becker, J. D; Moreira, L. M; Kapp, D.; Frosch, S. C; Puhler, A.; Perlick, A. M. 2001. "The nodulin VfENOD18 is an ATP-binding protein in infected cells of Vicia faba L. nodules", Plant Molecular Biology 47, 6: 749 - 759. |
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49. |
Becker, J. D. 2000. "Creativity and precision in evolutionary synthesis and the hierarchical selection scheme", Chaos Solitons & Fractals 11, 1-3: 345 - 350. |
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50. |
Hohnjec, N.; Kuster, H.; Albus, U.; Frosch, S. C; Becker, J. D; Puhler, A.; Perlick, A. M; Fruhling, M.. 2000. "The broad bean nodulin VfENOD18 is a member of a novel family of plant proteins with homologies to the bacterial MJ0577 superfamily", Molecular and General Genetics 264, 3: 241 - 250. |
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51. |
Moreira, L. M; Becker, J. D; Puhler, A.; Becker, A.. 2000. "The Sinorhizobium meliloti ExpE1 protein secreted by a type I secretion system involving ExpD1 and ExpD2 is required for biosynthesis
or secretion of the exopolysaccharide galactoglucan", Microbiology-Uk 146, 146: 2237 - 2248. |
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52. |
Hohnjec, N.; Becker, J. D; Puhler, A.; Perlick, A. M; Kuster, H.. 1999. "Genomic organization and expression properties of the MtSucS1 gene, which encodes a nodule-enhanced sucrose synthase in the
model legume Medicago truncatula", Molecular and General Genetics 261, 3: 514 - 522. |
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Indicadores de produção
(Production indicators)
Produção científica
Scientific production |
Produção científica Scientific production |
54 |
Livros e capítulos Books and book chapters |
2 |
Capítulos de livros publicados Published book chapters |
2 |
Artigos científicos em revistas Papers in periodics |
52 |
Com arbitragem científica With scientific refereeing |
52 |
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