Paulo de Castro Aguiar
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Data da última atualização
»Last update
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02/01/2015 |
Dados pessoais (Personal data)
Nome completo
Full name |
Paulo de Castro Aguiar |
Nome em citações bibliográficas
Quoting name |
Aguiar, Paulo |
Domínio científico de atuação
Scientific domain |
Ciências Médicas-Ciências da Saúde. Ciências Exactas-Matemática. Ciências Exactas-Física. Ciências Exactas-Ciências da Computação e da Informação. Engenharia e Tecnologia-Engenharia Médica.
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Endereço profissional
Professional address |
Universidade do Porto Faculdade de Ciências Centro de Matemática da Universidade do Porto (CMUP) Rua do Campo Alegre, 687 Porto 4169--007 Porto Portugal Telefone: (+351)220402266 Fax: (+351)220402209 Correio electrónico: pauloaguiar@fc.up.pt Homepage: http://www.fc.up.pt/pessoas/pauloaguiar/ |
Sexo
Gender |
Masculino»Male |
Graus Académicos
(Academic Degrees)
2001-2006 |
Doutoramento Phd |
Computational/Theoretical Neuroscience
(4 anos » years)
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University of Edinburgh,
Reino Unido. Com o tipo » With the type:
Equivalência » Equivalence.
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1995-2000 |
Licenciatura Licentiate degree |
Engª Física Tecnológica
(5 anos » years)
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Universidade Técnica de Lisboa,
Portugal.
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Formação complementar ( studies)
2003-2003 |
Curso de curta duração Short course |
Advanced Course in Computational Neuroscience (1 month course).
Federation of European Neurosciences / International Brain Research Organi,
França.
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2000-2001 |
Especialização/ Pós-Graduação Specialization/ Postgraduation |
Biophysics and Biomedical Engineering.
Universidade de Lisboa,
Portugal.
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Vínculos profissionais
(Professional Positions)
Instituto de Biologia Molecular e Celular |
Jun/2013-Actual |
Investigador Auxiliar |
Mai/2008-Mai/2013 |
Investigador Auxiliar |
Instituto de Biologia Molecular e Celular |
Dez/2005-Abr/2008 |
Investigador Auxiliar |
Set/2002-Jul/2004 |
Assistente |
Universidade Técnica de Lisboa |
Set/2000-Jul/2001 |
Estagiário Investigador |
Universidade Técnica de Lisboa |
Set/1998-Jul/2000 |
Assistente |
Atividades de Investigação e Desenvolvimento (Research and Development activities)
Instituto de Biologia Molecular e Celular |
Atividades de Ensino (Teaching activities)
Disciplinas lecionadas»Taught units:
- Mathematical Models in Biology [MSc](Regente)
- Introduction to Computational Neuroscience [PhD](Regente)
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Disciplinas lecionadas»Taught units:
- Neural Computation(Monitor)
- Learning from Data(Monitor)
- Maths refresher(Monitor)
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Universidade Técnica de Lisboa |
Disciplinas lecionadas»Taught units:
- Physics II [BSc](Monitor)
- Computational Physics [BSc](Monitor)
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Atividades de Conselhos, Comissões e Consultorias (Councils, Comissions and Consultancy activities)
Universidade Técnica de Lisboa |
Set/2000-Set/2001 |
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Membro de Conselho Consultivo |
Atividades de Extensão Universitária (Other services rendered through University)
Universidade Técnica de Lisboa |
Set/1999-Set/2000 |
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Atividade de extensão realizada»Extension activity rendered: - |
Linhas de Investigação (Research fields)
1. |
Computational Neuroscience; Mathematical models in biology |
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2. |
Mathematical Models in Biology |
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Projetos de Investigação (Research projects)
Participação como Investigador responsável Participation as responsible Researcher |
2007-2010 Theoretical models of nociceptive information processing and transmission in the spinal cord´s dorsal horn |
Referência do projeto»Project reference: PTDC /SAU-NEU/68929/2006.
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Participação como Investigador Participation as Researcher |
2011- Memristor Based Adaptive Neural Networks (MemBrAiNN) |
Referência do projeto»Project reference: PTDC/CTM-NAN/122868/2010. Parceiro(s)»Partners:
Universidade do Porto.
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1999-2001 Study of Type Ia supernovae and their cosmological implications |
Referência do projeto»Project reference: PESO/ESO/P/PRO/1257/98.
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Outro Tipo de Participação Other kind of participation |
2012- Y1 receptor based therapy for local bone repair: Antagonist behavior and delivery in challenged bone microenvironment |
Referência do projeto»Project reference: PTDC/BIM-MED/1047/2012.
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Línguas (Languages)
Compreende Understandig |
Português (Bem), Inglês (Bem), Francês (Razoavelmente), Japonês (Pouco). |
Fala Speaking |
Português (Bem), Inglês (Bem), Francês (Razoavelmente), Japonês (Pouco). |
Lê Reading |
Português (Bem), Inglês (Bem), Francês (Razoavelmente), Japonês (Pouco). |
Escreve Writing |
Português (Bem), Inglês (Bem), Francês (Razoavelmente), Japonês (Pouco). |
Prémios e títulos (Awards Prizes, and Honours)
2008 |
FENS 2008 Travel Award,
Portuguese Society for Neurosciences.
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2006 |
Postdoctoral fellowship,
FCT, MCTES Portugal.
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2005 |
Postdoctoral fellowship,
IBMC, Portugal.
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2000 |
PhD Scholarship,
FCT, MCTES Portugal.
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Membro de Associações Profissionais/Científicas (Professional/Scientific Association membership)
Actual |
Portuguese Society for Neurosciences, Membro.
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Produção científica, técnica e artística/cultural
(Scientific, technical and artistical/cultural
production)
Artigos em revistas com arbitragem científica Papers in periodics with scientific refereeing |
1. |
Sousa, M.; Aguiar, P.. 2014. "Building, simulating and visualizing large spiking neural networks with NeuralSyns", Neurocomputing 123, .: 372 - 380. |
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2. |
Barisic, M.; Aguiar, P.; Geley, S.; Maiato, H.. 2014. "Kinetochore motors drive congression of peripheral polar chromosomes by overcoming random arm-ejection forces", Nature Cell Biology 16, 12: 1249 - 1256. |
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Conde-Sousa, E.; Aguiar, P.. 2013. "A working memory model for serial order that stores information in the intrinsic excitability properties of neurons", Journal of Computational Neuroscience 35, 2: 187 - 199. |
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4. |
Szucs, P.; Luz, L.L.; Pinho, R.; Aguiar, P.; Antal, Z.; Tiong, S.Y.X.; Todd, A.J.; Safronov, B.V.. 2013. "Axon diversity of lamina I local-circuit neurons in the lumbar spinal cord", Journal of Comparative Neurology 521, 12: 2719 - 27. |
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5. |
Aguiar, P.; Horta, R.; Monteiro, D.; Silva, A.; Amarante, J.M.. 2013. "Evaluation of a facial transplant candidate with a facegram: A baseline analysis", Plastic and Reconstructive Surgery 132, 3: x - x. |
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6. |
Silva, P.; Garganta, J.; Araújo, D.; Davids, K.; Aguiar, P.. 2013. "Shared knowledge or shared affordances? insights from an ecological dynamics approach to team coordination in sports", Sports Medicine 43, 9: 765 - 772. |
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7. |
Carneiro, J.; Duarte-Pereira, S.; Azevedo, L.; Castro, L.F.C.; Aguiar, P.; Moreira, I.S.; Amorim, A.; Silva, R.M.. 2013. "The Evolutionary Portrait of Metazoan NAD Salvage", PLoS ONE 8, 5: x - x. |
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8. |
Aguiar, P.; Sousa, M.; Szucs, P.. 2013. "Versatile morphometric analysis and visualization of the three-dimensional structure of neurons", Neuroinformatics 11, 4: 393 - 403. |
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9. |
Pais-Vieira, M.; Aguiar, P.; Lima, D.; Galhardo, V.. 2012. "Inflammatory pain disrupts the orbitofrontal neuronal activity and risk-assessment performance in a rodent decision-making
task", Pain 153, 8: 1625 - 16. |
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10. |
Castro, L. F. C; Aguiar, P.. 2012. "Phase precession through acceleration of local theta rhythm: A biophysical model for the interaction between place cells and
local inhibitory neurons", Journal of Computational Neuroscience 33, 1: 141 - 150. |
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11. |
Pinto, S.; Krishna, R.; Dias, C.; Pimentel, G.; Oliveira, G.N.P.; Teixeira, J.M.; Aguiar, P.; Titus, E.; Gracio, J.; Ventura, J.; Araujo, J.P.. 2012. "Resistive switching and activity-dependent modifications in Ni-doped graphene oxide thin films", Applied Physics Letters 101, 6: x - x. |
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12. |
Aguiar, P.; Sousa, M.; Lima, D.. 2010. "NMDA channels together with L-type calcium currents and calcium-activated nonspecific cationic currents are sufficient to
generate windup in WDR neurons", Journal of Neurophysiology 104, 2: 1155 - 11. |
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13. |
Vourvouhaki, E.; Carvalho, C.; Aguiar, P.. 2007. "Model for Osteosarcoma-9 as a potent factor in cell survival and resistance to apoptosis", Physical Review E - Statistical, Nonlinear, and Soft Matter Physics 76, 1: x - x. |
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14. |
Aguiar, P.; Mendonça, L.; Galhardo, V.. 2007. "OpenControl: A free opensource software for video tracking and automated control of behavioral mazes", Journal of Neuroscience Methods 166, 1: 66 - 72. |
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Trabalhos completos/resumidos em eventos com arbitragem científica Papers in conference proceedings with scientific refereeing |
1. |
Sousa, Mafalda; Szucs, Peter; Aguiar, Paulo. 2013. "Reduction in inhibitory control is sufficient to generate hyperalgesia in a spiking model of nociceptive integration in the
superficial dorsal horn", Trabalho apresentado em CNS, In BMC Neuroscience 2013, 14(Suppl 1), Paris.
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2. |
Castro, Luísa; Aguiar, Paulo. 2013. "A model for grid cells where spatially correlated place cells compete for the grid map nodes", Trabalho apresentado em CNS, In BMC Neuroscience 2013, 14(Suppl 1), Paris.
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3. |
Conde-Sousa, E.; Aguiar, Paulo. 2013. "Conversion from spatial patterns of activity to sequences of neuronal activations using gate interneurons", Trabalho apresentado em CNS, In BMC Neuroscience 2013; 14(Suppl 1), Paris.
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4. |
Castro, Luísa; Aguiar, Paulo. 2011. "Phase precession through acceleration of local theta rhythm: a biophysical model for the interaction between complex spike
cells and theta cells", Trabalho apresentado em CNS, In BMC Neuroscience 2011, 12(Suppl 1), Stockholm.
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5. |
Aguiar, Paulo; Szucs, Peter. 2011. "Detailed visualization and morphometric analysis of reconstructed neurons using Blender and Python", Trabalho apresentado em CNS, In BMC Neuroscience 2011, 12(Suppl 1), Stockholm.
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6. |
Aguiar, Paulo; Sousa, Mafalda; Lima, Deolinda. 2010. "Analysis of the mechanisms underlying windup using a detailed biophysical model of WDR neurons", Trabalho apresentado em CNS, In BMC Neuroscience 2010, 11(Suppl 1), San Antonio.
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7. |
Aguiar, Paulo; Rodrigues, Miguel. 2009. "Neuronal connectivity inference from spike trains using an empirical probabilistic causality measure", Trabalho apresentado em CNS, In BMC Neuroscience 2009, 10(Suppl 1), Berlin.
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8. |
Sousa, Mafalda; Aguiar, Paulo. 2009. "NetBuilder: a tool for constructing large and complex neural networks", Trabalho apresentado em Portuguese Society for Neurosciences (SPN) Meeting, In Frontiers, Braga.
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9. |
Aguiar, Paulo. 2009. "NeuralSyns: A Novel Tool For Simulating Large Neuronal Networks With Complex Architectures", Trabalho apresentado em Portuguese Society for Neurosciences (SPN) Meeting, In Frontiers, Braga.
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10. |
Aguiar, Paulo; Willshaw, David. 2007. "Simulating large and heterogeneous networks of spiking neurons with SpiNet", Trabalho apresentado em CNS, In BMC Neuroscience 2007, 8(Suppl 2), Edinburgh.
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11. |
Mourao, Ana; Aguiar, Paulo; Cruz, Maria; Lopes, Ana. 2001. "Nearby Type Ia supernova searches: the Portuguese experience and plans for the future", Trabalho apresentado em 10th Portuguese Meeting in Astronomy and Astrophysics, In Astronomy and Astrophysics: Recent developments, Lisbon. |
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12. |
Cruz, Maria; Aguiar, Paulo; Lopes, Ana; Mourao, Ana. 2000. "Type Ia Supernova", Trabalho apresentado em PhD Euroconference - Simililarities and universality in relativistic flows, In Logos Verlag Berlin, Mykonos. |
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13. |
Aguiar, Paulo. 2000. "EEGSolver - Brain Activity and Genetic Algorithms", Trabalho apresentado em ACM - Symposium on Applied Computing, In SAC 2000 Proceedings, Como. |
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Artigos em revistas sem arbitragem científica Papers in periodics without scientific refereeing |
1. |
Sousa, M.; Szucs, P.; Lima, D.; Aguiar, P.. 2014. "The pronociceptive dorsal reticular nucleus contains mostly tonic neurons and shows a high prevalence of spontaneous activity
in block preparation", Journal of Neurophysiology 111, 7: 1507 - 1518.
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2. |
Castro, Luísa; Aguiar, Paulo. 2014. "A feedforward model for the formation of a grid field where spatial information is provided solely from place cells", Biological Cybernetics 108, 2: 133 - 143.
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3. |
Afonso, O.; Matos, I.; Pereira, A.J.; Aguiar, P.; Lampson, M.A.; Maiato, H.. 2014. "Feedback control of chromosome separation by a midzone Aurora B gradient", Science 345, 6194: 332 - 336. |
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4. |
Horta, R.; Aguiar, P.; Silva, P.; Monteiro, D.; Amarante, J.M.. 2014. "Facial disfigurement: Restoration of facial dynamics in a patient with concomitant facial paralysis and blindness", Journal of Reconstructive Microsurgery 30, 3: 207 - 210. |
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5. |
Neto, E.; Alves, C.J.; Sousa, D.M.; Alencastre, I.S.; Lourenço, A.H.; Leitão, L.; Ryu, H.R.; Jeon, N.L.; Fernandes, R.; Aguiar, P.; Almeida, R.D.; Lamghari, M.. 2014. "Sensory neurons and osteoblasts: Close partners in a microfluidic platform", Integrative Biology (United Kingdom) 6, 6: 586 - 595. |
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6. |
Silva, P.; Travassos, B.; Vilar, L.; Aguiar, P.; Davids, K.; Araújo, D.; Garganta, J.. 2014. "Numerical relations and skill level constrain co-adaptive behaviors of agents in sports teams", PLoS ONE 9, 9: 1 - 1. |
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7. |
Silva, P.; Duarte, R.; Sampaio, J.; Aguiar, P.; Davids, K.; Araújo, D.; Garganta, J.. 2014. "Field dimension and skill level constrain team tactical behaviours in small-sided and conditioned games in football", Journal of Sports Sciences 32, 20: 1888 - 18. |
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8. |
Silva, P.; Aguiar, P.; Duarte, R.; Davids, K.; Araújo, D.; Garganta, J.. 2014. "Effects of pitch size and skill level on tactical behaviours of association football players during small-sided and conditioned
games", International Journal of Sports Science and Coaching 9, 5: 993 - 10. |
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9. |
Horta, R.; Aguiar, P.; Monteiro, D.; Silva, A.; Amarante, J.M.. 2014. "A facegram for spatial-temporal analysis of facial excursion: Applicability in the microsurgical reanimation of long-standing
paralysis and pretransplantation", Journal of Cranio-Maxillofacial Surgery 42, 7: 1250 - 12. |
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10. |
Moutinho-Pereira, S.; Stuurman, N.; Afonso, O.; Hornsveld, M.; Aguiar, P.; Goshima, G.; Vale, R. D; Maiato, H.. 2013. "Genes involved in centrosome-independent mitotic spindle assembly in Drosophila S2 cells", Proceedings of the National Academy of Sciences 110, 49: 19808 - 19813.
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11. |
Horta, Ricardo; Aguiar, Paulo; Silva, Pedro; Monteiro, Diana; Amarante, José. 2013. "Facial Disfigurement: Restoration of Facial Dynamics in a Patient with Concomitant Facial Paralysis and Blindness", Journal of Reconstructive Microsurgery 30, 03: 207 - 210.
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12. |
Guimarães, J.; Moura, E.; Silva, E.; Aguiar, P.; Garrett, C.; Vieira-Coelho, M.A.. 2013. "Locus coeruleus is involved in weight loss in a rat model of Parkinson's disease: An effect reversed by deep brain stimulation", Brain Stimulation 6, 6: 845 - 855. |
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13. |
Aguiar, P.; Willshaw, D.. 2004. "Hippocampal mossy fibre boutons as dynamical synapses", Neurocomputing 58-60, .: 699 - 703. |
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Textos em jornais ou revistas Texts in newspapers or magazines |
1. |
Conde-Sousa, E.; Aguiar, Paulo. 01 jan. 2012. "Detailed mathematical models in neurobiology - Storing information in membrane conductances dynamics" CIM Buletin, 19 - 25. |
Outra produção científica Other scientific production |
1. |
Sousa, Mafalda; Szucs, Peter; Lima, Deolinda; Aguiar, Paulo. 2013. "The pronociceptive dorsal reticular nucleus contains mostly tonic neurons and frequently shows spontaneous activity without
ascending input from the spinal cord [!under review! - 2nd round - in JNeurophysiol]". *: *. |
2. |
Moutinho-Pereira, S.; Stuurman, N.; Aguiar, Paulo; Hornsveld, M.; Goshima, G.; Vale, R.; Maiato, Helder. 2013. "The Molecular Basis of Mitotic Spindle Adaptation to the Presence/Absence of Centrosomes [!under review! in PNAS]". *: *. |
3. |
Guerra, Luís; Aguiar, Paulo; Dias, Catarina; Ventura, J.. 2013. "Memristor-based Willshaw network: capacity and robustness to noise in the presence of defects [!under review! in Applied Physics
Letters]". *: *. |
4. |
Conde-Sousa, E.; Aguiar, Paulo. 2013. "Synergy between different membrane currents as a mechanism for one-shot short-term memory in a spiking network model [!under
review! - 2nd round - in IntJNeuralSystems]". *: *. |
5. |
Neto, Estrela; Alves, C.; Sousa, D.; Alencastre, Ines; Lourenço, A.; Leitão, L.; Ryu, H.; Jeon, N.; Aguiar, Paulo; Almeida, R; Lamghari, Meriem. 2013. "Bone cells and sensory neurons: close partners in a microfluidic platform [!under review! in Tissue Engineering]". *: *. |
6. |
Castro, Luísa; Aguiar, Paulo. 2013. "A feed-forward model for grid fields’ formation where spatial information is provided solely from place cells [!under review!
- 2nd round - in Biological Cybernetics]". *: *. |
Software sem registo ou patente Software without patent or official record |
1. |
Aguiar, Paulo. NeuralSyns - Simulation environment for large spiking neuronal networks,2013.
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2. |
Aguiar, Paulo. Py3DN - Morphometric analysis and visualization of the 3D structure of neurons,2012.
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3. |
Aguiar, Paulo. OpenControl - Automated control in behavioral experiments in Neuroscience,2007.
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Apresentação oral de trabalho Oral work presentation |
1. |
Neto, Estrela; Aguiar, Paulo; Almeida, R; Lamghari, Meriem. Quantitative method for assessing axonal outgrowth on microfluidic devices,Bioimaging 2012,2012 (Conferência ou palestra). |
Organização de evento Event organization |
1. |
Aguiar, Paulo. Mathematical Neuroscience Workshop,2012 (Oficina). |
Dados Complementares (Additional data)
Tese de Doutoramento Phd Thesis |
1. |
Maria Luísa Castro Guedes, Models for spatial information encoding in neuronal populations, 2013. Tese (Doctoral Program in Applied Mathematics) - Universidade do Porto, Bolseiro(a) de Fundação para a Ciência e a Tecnologia (Orientador). |
1. |
Maria Mafalda Sousa, Construction and analysis of detailed biophysical models for DRt and Lamina I neurons, 2014. Tese (Doctoral Program in Neuroscience) - Universidade do Porto, Bolseiro(a) de Fundação para a Ciência e a Tecnologia (Orientador). |
2. |
Eduardo Conde-Sousa, Spiking neural networks and applications in working memory, 2014. Tese (Doctoral Program in Applied Mathematics) - Universidade do Porto, Bolseiro(a) de Fundação para a Ciência e a Tecnologia (Orientador). |
3. |
Ricardo Horta, Facegrams for spacio-temporal analysis of facial anatomical landmarks trajectories, 2014. Tese (Doctoral Program in Medicine) - Universidade do Porto (Co-orientador). |
Dissertação de Mestrado Master degree dissertation |
1. |
Mariana Cunha, Quantification of flux and time decay of microtubules in the mitotic spindle [Final grade 19/20], 2012. Dissertação (Masters in Mathematical Engineering) - Universidade do Porto (Orientador). |
Participação no júri de Graus Académicos Academic Degrees jury participation |
1. |
Aguiar, Paulo. Titulo do Trabalho, 2010. |
Indicadores de produção
(Production indicators)
Produção científica
Scientific production |
Produção técnica
Technical production |
Dados complementares
data |
Produção científica Scientific production |
47 |
Artigos científicos em revistas Papers in periodics |
27 |
Com arbitragem científica With scientific refereeing |
14 |
Sem arbitragem científica Without scientific refereeing |
13 |
Trabalhos em eventos Papers in conference proceedings |
13 |
Com arbitragem científica With scientific refereeing |
13 |
Textos em jornais ou revistas Texts in journals or magazines |
1 |
Outros tipos de produção científica Other scientific production |
6 |
Produção técnica Technical production |
5 |
Software sem registo ou patente Software without patent or official record |
3 |
Outros tipos de produção técnica Other technical production |
2 |
Dados complementares (Additional data) |
7 |
Orientações Orientations |
6 |
Participação no Júri de Graus Académicos Academic Degrees jury participation |
1 |
Visualizações do curriculum [
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