Cátia Matos Salgado
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Data da última atualização
»Last update
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29/11/2017 |
Dados pessoais (Personal data)
Nome completo
Full name |
Cátia Matos Salgado |
Nome em citações bibliográficas
Quoting name |
Salgado, Cátia Matos |
Domínio científico de atuação
Scientific domain |
Engenharia e Tecnologia-Engenharia Médica.
Ciências Médicas-Biotecnologia Médica.
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Endereço profissional
Professional address |
Universidade Técnica de Lisboa
Instituto Superior Técnico
Avenida Rovisco Pais 1
1049-001 Lisboa
Portugal
Correio electrónico: catiasalgado@live.com |
Sexo
Gender |
Feminino»Female |
Graus Académicos
(Academic Degrees)
| 2014-2015 |
Mestrado
Master degree |
Executive Masters in Bioengineering Systems
(1 anos » years)
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MIT Portugal,
Portugal.
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| 2007-2012 |
Mestrado
Master degree |
Mestrado Integrado em Engenharia Biomédica - Ramo de Informática Médica
(5 anos » years)
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Universidade do Minho,
Portugal.
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Vínculos profissionais
(Professional Positions)
| Universidade Técnica de Lisboa |
| Nov/2014-Actual |
Outra Situação |
| Universidade Técnica de Lisboa |
| Dez/2015-Mar/2016 |
Outra Situação |
| Mai/2014-Ago/2014 |
Outra Situação |
| Dez/2012-Dez/2013 |
Estagiário |
Atividades de Investigação e Desenvolvimento (Research and Development activities)
Estágios realizados (Traineeships)
Estágios realizados»Traineeships:
- IT and database manager
- Web manager
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Linhas de Investigação (Research fields)
| 1. |
Inference of a Gene Regulatory Network for Helicobacter pylori from Expression Data Using Direct and Module Based Inference
Methods
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Objectivos»Goals:
The reconstruction of Gene Regulatory Networks (GRN) from experimental data is one of the most important goals in systems
biology, and holds great promise in elucidating the causal behavior of genes in normal cell physiology and pathologic phenotypes.
Hence, the main goal of this work is to assess the performance of different prominent Gene Regulatory Network Inference (GRNI)
methods in determining a GRN for Helicobacter pylori, from an ensemble of microarray data. A plethora of methods was implemented
and their performance assessed as compared to a true regulatory network. Common predicted interactions not present in the
true network were also investigated. The results show that ARACNE, CLR and MRNET globally outperform C3NET, Lemon-Tree and
GENIE3. However, since the reference network is not the true regulatory network of H. pylori all methods show an overall low
recall and precision. Additionally, CLR and MRNET show a high degree of complementarity as measured by the Jaccard similarity
coefficient and by the intersection of correctly inferred interactions. Further investigation is required in order to validate
and infer novel gene interactions..
Palavras-chave:
gene regulatory network (GRN); Helicobater pylori; microarray expression data; Reverse engineering.
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Projetos de Investigação (Research projects)
Participação como Investigador
Participation as Researcher |
2016-
iDecision4Care - Intelligent Decision Support Systems in Healthcare |
| Referência do projeto»Project reference: IF/00833/2014/CP1238/CT0002.
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2014-
IC4U – Decision support system for preventing ICU readmissions |
| Referência do projeto»Project reference: PTDC/EMS-SIS/3220/2012.
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Línguas (Languages)
Compreende
Understandig |
Inglês (Bem), Português (Bem). |
Fala
Speaking |
Inglês (Bem), Português (Bem). |
Lê
Reading |
Inglês (Bem), Português (Bem). |
Escreve
Writing |
Inglês (Bem), Português (Bem). |
Prémios e títulos (Awards Prizes, and Honours)
| 2016 |
Travel grant award to attend the IEEE WCCI 2016 (Vancouver, Canada) given the high quality of the work submitted. . |
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Travel grant award to attend the IPMU 2016 (Eindhoven, The Netherlands) given the high quality of the work submitted. . |
Produção científica, técnica e artística/cultural
(Scientific, technical and artistical/cultural
production)
Capítulos de livros publicados
Published book chapters |
| 1. |
Data, Mit C; Salgado, Cátia M; Vieira, Susana M. 2016. Missing data (in press). In Secondary Analysis of Electronic Health Records, 1 - 1. ISBN: 978-3-319-43740-8. In press: Springer.
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| 2. |
 Salgado, Cátia M; Vieira, Susana M; Sousa, João M. C. 2016. Fuzzy Modeling Based on Mixed Fuzzy Clustering for Multivariate Time Series of Unequal Lengths. In Information Processing and Management of Uncertainty in Knowledge-Based Systems, ed. Joao Paulo Carvalho, Marie-Jeanne Lesot, Uzay Kaymak, Susana Vieira, Bernadette Bouchon-Meunier, Ronald R. Yager, 741 - 751. ISBN: 978-3-319-40580-3. Eindhoven, The Netherlands: Springer International Publishing.
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| 3. |
Data, Mit C; Salgado, Cátia M; Vieira, Susana M. 2016. Outliers (in press). In Secondary Analysis of Electronic Health Records, 1 - 1. ISBN: 978-3-319-43740-8. In press: Springer.
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| 4. |
Salgado, Cátia; Cardoso, Luciana; Gonçalves, Pedro; Abelha, António; Machado, José. 2013. Tracking People and Equipment Simulation inside Healthcare Units. In Ambient Intelligence - Software and Applications, ed. Ad van BerloKasper HallenborgJuan M. Corchado RodríguezDante I. TapiaPaulo Novais, 9 - 16. ISBN: 978-3-319-00565-2. Heidelberg: Springer International Publishing.
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Artigos em revistas sem arbitragem científica
Papers in periodics without scientific refereeing |
| 1. |
Salgado, Cátia M; Vieira, Susana M; Mendonça, Luís F; Finkelstein, Stan; Sousa, João M. 2016. "Ensemble fuzzy models in personalized medicine: Application to vasopressors administration", Engineering Applications of Artificial Intelligence 49, 1: 141 - 148.
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| 2. |
Pereira, Rúben D. M. A; Salgado, Cátia M; Dejam, Andre; Reti, Shane R; Vieira, Susana M; Sousa, João M. C; Celi, Leo A; Finkelstein, Stan N. 2015. "Fuzzy Modeling to Predict Severely Depressed Left Ventricular Ejection Fraction following Admission to the Intensive Care
Unit Using Clinical Physiology", The Scientific World Journal 2015, 1: 1 - 9.
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Trabalhos completos/resumidos em eventos sem arbitragem científica
Papers in conference proceedings without scientific refereeing |
| 1. |
Curto, Sérgio; Carvalho, João P; Salgado, Cátia M; Vieira, Susana M; Sousa, João M. C. 2016. "Predicting ICU readmissions based on bedside medical text notes", Trabalho apresentado em EEE World Congress on Computational Intelligence (IEEE WCCI), In 2016 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), Vancouver, Canadá.
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| 2. |
Cunha, Vanessa; Salgado, Cátia M; Vieira, Susana M; Sousa, João M. 2016. "Fuzzy Modeling to Predict Short and Long-Term Mortality Among Patients with Acute Kidney Injury", Trabalho apresentado em IEEE World Congress on Computational Intelligence (IEEE WCCI), In 2016 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), Vancouver, Canadá. |
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| 3. |
Ferreira, Marta C; Salgado, Catia M; Viegas, Joaquim L; Schafer, Hanna; Azevedo, Carlos S; Vieira, Susana M; Sousa, Joao M. C. 2015. "Fuzzy modeling based on Mixed Fuzzy Clustering for health care applications", Trabalho apresentado em 2015 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), In 2015 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), Istanbul, Turkey.
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| 4. |
Salgado, Catia M; Azevedo, Carlos S; Garibaldi, Jonathan; Vieira, Susana M. 2015. "Ensemble fuzzy classifiers design using weighted aggregation criteria", Trabalho apresentado em 2015 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), In 2015 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), Istanbul, Turkey.
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Apresentação oral de trabalho
Oral work presentation |
| 1. |
Salgado, Cátia M. Fuzzy Modeling Based on Mixed Fuzzy Clustering for Multivariate Time Series of Unequal Lengths,IPMU 2016 – International Conference on Information Processing and Management of Uncertainty in Knowledge-Based Systems.,Eindhoven,2016 (Conferência ou palestra).
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| 2. |
Salgado, Cátia M. Fuzzy Modeling to Predict Short and Long-Term Mortality Among Patients with Acute Kidney Injury,IEEE WCCI 2016 – IEEE World Congress on Computational Intelligence.,Vancouver,2016 (Conferência ou palestra).
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| 3. |
Salgado, Cátia M. Ensemble Fuzzy Classifiers Design Using Weighted Aggregation Criteria,FUZZ-IEEE 2015 – IEEE International Conference on Fuzzy Systems,Istambul,2015 (Conferência ou palestra).
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| 4. |
Salgado, Cátia M. Ensemble Fuzzy Classifiers Design Using Weighted Aggregation Criteria,3º EJIL – Encontro Jovens Investigadores do LAETA,Coimbra,2015 (Conferência ou palestra). |
| 5. |
Salgado, Cátia M. Fuzzy modeling based on Mixed Fuzzy Clustering for health care applications,FUZZ-IEEE 2015 IEEE International Conference on Fuzzy Systems,Istambul,2015 (Conferência ou palestra).
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Indicadores de produção
(Production indicators)
Produção científica
Scientific production |
Produção técnica
Technical production |
Produção científica
Scientific production |
10 |
Livros e capítulos
Books and book chapters |
4 |
Capítulos de livros publicados
Published book chapters |
4 |
Artigos científicos em revistas
Papers in periodics |
2 |
Sem arbitragem científica
Without scientific refereeing |
2 |
Trabalhos em eventos
Papers in conference proceedings |
4 |
Sem arbitragem científica
Without scientific refereeing |
4 |
Produção técnica
Technical production |
5 |
Outros tipos de produção técnica
Other technical production |
5 |
Outras informações relevantes
| Experience in: Programming languages: Prolog, Java, HTML, PHP, SQL, UNIX shell scripting, Matlab, R; Tools: Photoshop, Latex,
ImageJ, Pentaho, Eclipse, Netbeans, JAABA, Weka, Cytoscape
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